CGA Tools Help Forum

TopicRepliesCreatedLast replysort icon
MutSigCV gene covariates and full exome coverage, gene symbol discrepancies. 0 2 weeks 1 day ago
by anandmt
n/a
SomaticAnalysisTK.jar 0 3 weeks 2 days ago
by lucasl
n/a
MutSig error 3 1 year 6 weeks ago
by p_charoentong
3 weeks 4 days ago
by thmourikis
Polysolver troubleshooting installation <--Help! 0 4 weeks 4 days ago
by SIImlinan
n/a
Bug in MutSigSV_1.4 ? 0 5 weeks 3 days ago
by teo_sakel
n/a
MutSigCV Pre-Processing Error - MatLab version incompatibility issue? 1 9 weeks 2 days ago
by Nicholas Younger
9 weeks 2 days ago
by mshpak
Computing categ values for MutSigCV input mutation tables 0 10 weeks 2 days ago
by mshpak
n/a
D-ToxoG error 0 12 weeks 5 days ago
by weilai.dong
n/a
POLYSOLVER Installation 0 15 weeks 4 days ago
by ericg
n/a
D-ToxoG test data and maf-composing utility? 2 51 weeks 3 days ago
by pruzanov
16 weeks 3 days ago
by gsaksena
Rescuing tumor in normal variants due to tissue-adjacent contamination 0 18 weeks 4 days ago
by tbrunetti
n/a
MutSigCV error "not enough mutations to analyze" 4 3 years 3 weeks ago
by slg
19 weeks 2 days ago
by xiayh
How to Specify Genome Build in MutSigCV Input ? 1 44 weeks 12 hours ago
by Hasani
21 weeks 4 days ago
by Shobana
RNA-SeQC GC stratification problem 0 26 weeks 11 hours ago
by dusan_randjelovic
n/a
Extract the sample/gene background mutation calculation 0 27 weeks 2 days ago
by fgruber
n/a
How to generate 'categ' field? 1 2 years 37 weeks ago
by subright
27 weeks 4 days ago
by biomrpaul
What is the minimum sample number to run MutSigCV? 0 28 weeks 2 days ago
by yujun3315
n/a
License information of d-ToxoG 0 28 weeks 3 days ago
by shakuras
n/a
RNASeqc not work with hg38 gtf 0 29 weeks 2 days ago
by mpolano
n/a
How do I run Indelocator? 0 32 weeks 4 days ago
by vdionellis
n/a
MutSigCV mm9 0 35 weeks 1 day ago
by sophiespo
n/a
Picard ReorderSam 0 36 weeks 4 days ago
by lemelior
n/a
rnaseqc strange results 0 37 weeks 6 days ago
by mpolano
n/a
How to use MutSigCV 1 47 weeks 6 days ago
by bioxujintian
44 weeks 8 hours ago
by Hasani
MutSig_preprocess error 0 48 weeks 16 hours ago
by farmer
n/a