CGA Tools Help Forum

TopicRepliessort iconCreatedLast reply
MutSigCV gene covariates and full exome coverage, gene symbol discrepancies. 0 1 week 4 days ago
by anandmt
n/a
SomaticAnalysisTK.jar 0 2 weeks 5 days ago
by lucasl
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Polysolver troubleshooting installation <--Help! 0 4 weeks 16 hours ago
by SIImlinan
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Bug in MutSigSV_1.4 ? 0 5 weeks 7 hours ago
by teo_sakel
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Computing categ values for MutSigCV input mutation tables 0 9 weeks 5 days ago
by mshpak
n/a
D-ToxoG error 0 12 weeks 2 days ago
by weilai.dong
n/a
POLYSOLVER Installation 0 15 weeks 20 hours ago
by ericg
n/a
Rescuing tumor in normal variants due to tissue-adjacent contamination 0 18 weeks 18 hours ago
by tbrunetti
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RNA-SeQC GC stratification problem 0 25 weeks 4 days ago
by dusan_randjelovic
n/a
Extract the sample/gene background mutation calculation 0 26 weeks 5 days ago
by fgruber
n/a
What is the minimum sample number to run MutSigCV? 0 27 weeks 5 days ago
by yujun3315
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License information of d-ToxoG 0 28 weeks 13 hours ago
by shakuras
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RNASeqc not work with hg38 gtf 0 28 weeks 5 days ago
by mpolano
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How do I run Indelocator? 0 32 weeks 1 day ago
by vdionellis
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MutSigCV mm9 0 34 weeks 5 days ago
by sophiespo
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Picard ReorderSam 0 36 weeks 20 hours ago
by lemelior
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rnaseqc strange results 0 37 weeks 3 days ago
by mpolano
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MutSig_preprocess error 0 47 weeks 4 days ago
by farmer
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"Subscripted assignment dimension mismatch" error for web-based MutSig results 0 48 weeks 3 days ago
by dreamerwu
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HAPSEG & ABSOLUTE : input from CytoScan HD and Oncoscan 0 49 weeks 4 days ago
by dumanoir
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ABSOLUTE input 0 51 weeks 1 day ago
by vakulmohanty
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ContEst for sequencing data 0 1 year 15 weeks ago
by rebecca
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ChainFinder pipeline 0 1 year 15 weeks ago
by andreasottoriva
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Running D-ToxoG without a Matlab license 0 1 year 18 weeks ago
by jchellmuth
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ABSOLUTE using Oncoscan copy number 0 1 year 22 weeks ago
by inodb
n/a